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    1700122O11Rikl RIKEN cDNA 1700122O11 gene like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100911489, updated on 17-Aug-2024

    Summary

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    Official Symbol
    1700122O11Riklprovided by RGD
    Official Full Name
    RIKEN cDNA 1700122O11 gene likeprovided by RGD
    Primary source
    RGD:6492882
    See related
    AllianceGenome:RGD:6492882
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Testes (RPKM 13.0), Thymus (RPKM 3.9) and 6 other tissues See more
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    Genomic context

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    See 1700122O11Rikl in Genome Data Viewer
    Location:
    9q12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (20435025..20440590)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (12937444..12943012)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (16137061..16140650)

    Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene RGD1565959 Neighboring gene RIKEN cDNA 1700067P10 gene like Neighboring gene uncharacterized LOC134480339 Neighboring gene uncharacterized LOC134480268

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • histone H3.v1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_185297.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000009

    2. NR_185298.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000009

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086027.1 Reference GRCr8

      Range
      20435025..20440590
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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