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    lbp-1 Fatty acid-binding protein homolog 1 [ Caenorhabditis elegans ]

    Gene ID: 180616, updated on 9-Dec-2024

    Summary

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    Official Symbol
    lbp-1
    Official Full Name
    Fatty acid-binding protein homolog 1
    Primary source
    WormBase:WBGene00002253
    Locus tag
    CELE_F40F4.3
    See related
    AllianceGenome:WB:WBGene00002253
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable lipid binding activity. Predicted to be located in extracellular region. Is expressed in several structures, including head mesodermal cell; hypodermis; intestine; rectal gland cell; and vulval muscle. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See lbp-1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    3
    Sequence:
    Chromosome: X; NC_003284.9 (3259142..3259812)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Tubulin alpha chain Neighboring gene ncRNA Neighboring gene Cytosolic fatty-acid binding proteins domain-containing protein;Fatty acid-binding protein homolog 3 Neighboring gene Fatty acid-binding protein homolog 2 Neighboring gene F-box domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The type I membrane protein EFF-1 is essential for developmental cell fusion. Mohler WA, et al. Dev Cell, 2002 Mar. PMID 11879640
    2. Optical imaging of cell fusion and fusion proteins in Caenorhabditis elegans. Ems S, et al. Methods Mol Biol, 2008. PMID 18979247
    3. Secretion of a novel class of iFABPs in nematodes: coordinate use of the Ascaris/Caenorhabditis model systems. Plenefisch J, et al. Mol Biochem Parasitol, 2000 Feb 5. PMID 10693745
    4. Imaging Epidermal Cell Rearrangement in the C. elegans Embryo. Hardin J, et al. Methods Mol Biol, 2022. PMID 35147953, Free PMC Article
    5. Caenorhabditis elegans as a screening tool for the endothelial cell-derived putative aging-related proteins detected by proteomic analysis. Ha MK, et al. Proteomics, 2006 Jun. PMID 16673436

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Fatty acid-binding protein homolog 1
    NP_508557.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      3259142..3259812
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_076156.8 → NP_508557.1  Fatty acid-binding protein homolog 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508557.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q20223
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q20223.1

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