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    F30F8.9 Letm1 RBD domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172550, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F30F8.9
    Official Full Name
    Letm1 RBD domain-containing protein
    Primary source
    WormBase:WBGene00009276
    Locus tag
    CELE_F30F8.9
    See related
    AllianceGenome:WB:WBGene00009276
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ribosome binding activity. Predicted to be located in membrane. Predicted to be active in mitochondrion. Orthologous to human LETMD1 (LETM1 domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F30F8.9 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    10
    Sequence:
    Chromosome: I; NC_003279.8 (7837064..7840022)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene RING-type domain-containing protein Neighboring gene General receptor for phosphoinositides 1-associated scaffold protein 1 homolog Neighboring gene N-alpha-acetyltransferase 60;histone acetyltransferase Neighboring gene tRNA Neighboring gene MATH domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Germline Maintenance Through the Multifaceted Activities of GLH/Vasa in Caenorhabditis elegans P Granules. Marnik EA, et al. Genetics, 2019 Nov. PMID 31506335, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ribosome binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Letm1 RBD domain-containing protein
    NP_492165.1
    • Confirmed by transcript evidence
    NP_871881.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      7837064..7840022
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_182081.6 → NP_871881.1  Letm1 RBD domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_871881.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8I4K3
      Conserved Domains (1) summary
      pfam07766
      Location:53 → 272
      LETM1; LETM1-like protein

    2. NM_059764.5 → NP_492165.1  Letm1 RBD domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492165.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95QI1
      Conserved Domains (1) summary
      pfam07766
      Location:53 → 272
      LETM1; LETM1-like protein
    Nucleotide Protein
    Heading Accession and Version

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