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    • Showing Current items.

    srh-40 Serpentine Receptor, class T [ Caenorhabditis elegans ]

    Gene ID: 191859, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srh-40
    Official Full Name
    Serpentine Receptor, class T
    Primary source
    WormBase:WBGene00005263
    Locus tag
    CELE_Y40D12A.3
    See related
    AllianceGenome:WB:WBGene00005263
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srh-40 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    4
    Sequence:
    Chromosome: III; NC_003281.10 (6610822..6612561)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Malate dehydrogenase, mitochondrial Neighboring gene Protein-tyrosine phosphatase Neighboring gene Carboxypeptidase Neighboring gene Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 Neighboring gene Uncharacterized protein Neighboring gene putative coatomer subunit delta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. G protein-coupled receptor-based thermosensation determines temperature acclimatization of Caenorhabditis elegans. Ohnishi K, et al. Nat Commun, 2024 Feb 23. PMID 38396085, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class T
    NP_498459.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      6610822..6612561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066058.2 → NP_498459.1  Serpentine Receptor, class T [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498459.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O76724
      Conserved Domains (1) summary
      pfam10318
      Location:17 → 324
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
    Nucleotide Protein
    Heading Accession and Version

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