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    ttr-51 Transthyretin-like family protein [ Caenorhabditis elegans ]

    Gene ID: 178282, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ttr-51
    Official Full Name
    Transthyretin-like family protein
    Primary source
    WormBase:WBGene00010440
    Locus tag
    CELE_JC8.8
    See related
    AllianceGenome:WB:WBGene00010440
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in cell surface and extracellular region. Is expressed in spermatheca. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ttr-51 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    2
    Sequence:
    Chromosome: IV; NC_003282.8 (13250655..13252311, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene CMP/dCMP-type deaminase domain-containing protein Neighboring gene Cytochrome c oxidase assembly protein COX11, mitochondrial Neighboring gene Zinc finger, CCHC-type Neighboring gene Transthyretin-like family protein Neighboring gene Transmembrane protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. C. elegans feed yolk to their young in a form of primitive lactation. Kern CC, et al. Nat Commun, 2021 Oct 5. PMID 34611154, Free PMC Article
    2. Germline Maintenance Through the Multifaceted Activities of GLH/Vasa in Caenorhabditis elegans P Granules. Marnik EA, et al. Genetics, 2019 Nov. PMID 31506335, Free PMC Article
    3. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
    4. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    5. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Transthyretin-like family protein
    NP_502549.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      13250655..13252311 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070148.9 → NP_502549.2  Transthyretin-like family protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502549.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O62289
      Conserved Domains (1) summary
      pfam01060
      Location:26 → 105
      TTR-52; Transthyretin-like family
    Nucleotide Protein
    Heading Accession and Version

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