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    • Showing Current items.

    F19C6.3 VWFC domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 184675, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F19C6.3
    Official Full Name
    VWFC domain-containing protein
    Primary source
    WormBase:WBGene00008952
    Locus tag
    CELE_F19C6.3
    See related
    AllianceGenome:WB:WBGene00008952
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable calcium ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F19C6.3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    10
    Sequence:
    Chromosome: X; NC_003284.9 (10005304..10008764, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor kinase 1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Peptidase_M13 domain-containing protein;Peptidase_M13_N domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    VWFC domain-containing protein
    NP_509679.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      10005304..10008764 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077278.4 → NP_509679.1  VWFC domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509679.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q09538
      Conserved Domains (3) summary
      smart00179
      Location:377 → 416
      EGF_CA; Calcium-binding EGF-like domain
      smart00214
      Location:216 → 270
      VWC; von Willebrand factor (vWF) type C domain
      pfam12947
      Location:346 → 375
      EGF_3; EGF domain
    Nucleotide Protein
    Heading Accession and Version

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