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    srh-2 G protein-coupled receptor;Serpentine Receptor, class H [ Caenorhabditis elegans ]

    Gene ID: 178584, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srh-2
    Official Full Name
    G protein-coupled receptor;Serpentine Receptor, class H
    Primary source
    WormBase:WBGene00005228
    Locus tag
    CELE_C05E4.14
    See related
    AllianceGenome:WB:WBGene00005228
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in several structures, including Eala; Ealp; Eara; Earp; and intestine. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srh-2 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    10
    Sequence:
    Chromosome: V; NC_003283.11 (728301..734305)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene F-box domain-containing protein Neighboring gene Malate synthase Neighboring gene ncRNA Neighboring gene Serpentine Receptor, class J Neighboring gene Serpentine Receptor, class J

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Keller-Segel model for C elegans L1 aggregation. Avery L, et al. PLoS Comput Biol, 2021 Jul. PMID 34324494, Free PMC Article
    2. G protein-coupled receptor-based thermosensation determines temperature acclimatization of Caenorhabditis elegans. Ohnishi K, et al. Nat Commun, 2024 Feb 23. PMID 38396085, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    G protein-coupled receptor;Serpentine Receptor, class H
    NP_001021364.2
    • Confirmed by transcript evidence
    NP_001300041.1
    • Confirmed by transcript evidence
    NP_001300042.1
    • Confirmed by transcript evidence
    NP_001300043.1
    • Confirmed by transcript evidence
    NP_001300044.1
    • Confirmed by transcript evidence
    NP_001300045.1
    • Confirmed by transcript evidence
    NP_001300046.1
    • Partially confirmed by transcript evidence
    NP_001300047.1
    • Partially confirmed by transcript evidence
    NP_001367443.1
    • Confirmed by transcript evidence
    NP_001379628.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      728301..734305
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392470.1 → NP_001379628.1  Serpentine Receptor, class H [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KYH0
      Conserved Domains (1) summary
      cl11665
      Location:20 → 253
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

    2. NM_001026193.4 → NP_001021364.2  G protein-coupled receptor [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021364.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      E4MVC8
      Conserved Domains (1) summary
      cl11665
      Location:82 → 177
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

    3. NM_001313113.1 → NP_001300042.1  Serpentine Receptor, class H [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ART6
      Conserved Domains (1) summary
      cl11665
      Location:62 → 338
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

    4. NM_001313114.1 → NP_001300043.1  G protein-coupled receptor [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AVB8
      Conserved Domains (1) summary
      cl11665
      Location:88 → 183
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

    5. NM_001313115.1 → NP_001300044.1  Serpentine Receptor, class H [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AXL3
      Conserved Domains (1) summary
      cl11665
      Location:66 → 189
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

    6. NM_001380592.1 → NP_001367443.1  Serpentine Receptor, class H [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KYG9
      Conserved Domains (1) summary
      cl11665
      Location:56 → 332
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

    7. NM_001313112.1 → NP_001300041.1  Serpentine Receptor, class H [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AUP2
      Conserved Domains (1) summary
      cl11665
      Location:60 → 183
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

    8. NM_001313116.1 → NP_001300045.1  Serpentine Receptor, class H [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ASA1
      Conserved Domains (1) summary
      cl11665
      Location:36 → 301
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

    9. NM_001313117.1 → NP_001300046.1  G protein-coupled receptor [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AUP8
      Conserved Domains (1) summary
      cl11665
      Location:51 → 146
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

    10. NM_001313118.1 → NP_001300047.1  Serpentine Receptor, class H [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ARU0
      Conserved Domains (1) summary
      cl11665
      Location:29 → 152
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
    Nucleotide Protein
    Heading Accession and Version

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