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    C56E6.2 Ras-related protein Rab-21 [ Caenorhabditis elegans ]

    Gene ID: 174077, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C56E6.2
    Official Full Name
    Ras-related protein Rab-21
    Primary source
    WormBase:WBGene00016970
    Locus tag
    CELE_C56E6.2
    See related
    AllianceGenome:WB:WBGene00016970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable GTPase activity. Predicted to be involved in intracellular protein transport. Predicted to be active in endomembrane system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C56E6.2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003280.10 (6524927..6526324)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Doublecortin domain-containing protein Neighboring gene ncRNA Neighboring gene ABC transporter domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in early endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in endomembrane system IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Ras-related protein Rab-21
    NP_495318.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      6524927..6526324
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062917.8 → NP_495318.2  Ras-related protein Rab-21 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495318.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18898
      Conserved Domains (2) summary
      cd00154
      Location:54 → 200
      Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
      COG1100
      Location:50 → 264
      Gem1; GTPase SAR1 family domain [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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