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    • Showing Current items.

    perm-2 Secreted protein [ Caenorhabditis elegans ]

    Gene ID: 176933, updated on 9-Dec-2024

    Summary

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    Official Symbol
    perm-2
    Official Full Name
    Secreted protein
    Primary source
    WormBase:WBGene00016636
    Locus tag
    CELE_C44B12.1
    See related
    AllianceGenome:WB:WBGene00016636
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in oocyte. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See perm-2 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    5
    Sequence:
    Chromosome: IV; NC_003282.8 (1126790..1128865)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene PERMeable eggshell Neighboring gene AAI domain-containing protein;Clip domain-containing protein;Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CBD-1 organizes two independent complexes required for eggshell vitelline layer formation and egg activation in C. elegans. González DP, et al. Dev Biol, 2018 Oct 15. PMID 30120927, Free PMC Article
    2. SUMO peptidase ULP-4 regulates mitochondrial UPR-mediated innate immunity and lifespan extension. Gao K, et al. Elife, 2019 Jan 15. PMID 30642431, Free PMC Article
    3. Galectin LEC-1 plays a defensive role against damage due to oxidative stress in Caenorhabditis elegans. Takeuchi T, et al. J Biochem, 2013 Nov. PMID 23935187
    4. Functional identification of microRNA-centered complexes in C. elegans. Hebbar S, et al. Sci Rep, 2022 May 3. PMID 35504914, Free PMC Article
    5. A combined binary interaction and phenotypic map of C. elegans cell polarity proteins. Koorman T, et al. Nat Cell Biol, 2016 Mar. PMID 26780296, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Secreted protein
    NP_500042.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      1126790..1128865
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067641.8 → NP_500042.1  Secreted protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500042.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O44145
    Nucleotide Protein
    Heading Accession and Version

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