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    F08B12.4 Secreted protein [ Caenorhabditis elegans ]

    Gene ID: 181333, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F08B12.4
    Official Full Name
    Secreted protein
    Primary source
    WormBase:WBGene00008572
    Locus tag
    CELE_F08B12.4
    See related
    AllianceGenome:WB:WBGene00008572
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Located in nucleus. Is expressed in body wall musculature; intestine; metacorpus; rectal valve cell; and tail. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F08B12.4 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    4
    Sequence:
    Chromosome: X; NC_003284.9 (11407054..11407732, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Peroxisome assembly protein 12 Neighboring gene Ion_trans_2 domain-containing protein Neighboring gene ncRNA Neighboring gene Eukaryotic translation initiation factor 2-alpha kinase pek-1 Neighboring gene Transmembrane protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Determining the sub-cellular localization of proteins within Caenorhabditis elegans body wall muscle. Meissner B, et al. PLoS One, 2011. PMID 21611156, Free PMC Article
    2. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    Secreted protein
    NP_001257150.1
    • Confirmed by transcript evidence
    NP_001257151.1
    • Confirmed by transcript evidence
    NP_001257152.1
    • Confirmed by transcript evidence
    NP_001257156.1
    • Partially confirmed by transcript evidence
    NP_001362049.1
    • Partially confirmed by transcript evidence
    NP_001366743.1
    • Partially confirmed by transcript evidence
    NP_001368115.1
    • Confirmed by transcript evidence
    NP_001368116.1
    • Confirmed by transcript evidence
    NP_001368117.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      11407054..11407732 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001381103.2 → NP_001368116.1  Secreted protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2R2

    2. NM_001270222.5 → NP_001257151.1  Secreted protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001257151.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B6VQ74

    3. NM_001381102.2 → NP_001368117.1  Secreted protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2R8

    4. NM_001270221.4 → NP_001257150.1  Secreted protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001257150.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2R9

    5. NM_001270223.3 → NP_001257152.1  Secreted protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001257152.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2R1

    6. NM_001381104.1 → NP_001368115.1  Secreted protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2R0

    7. NM_001375135.1 → NP_001362049.1  Secreted protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2S0

    8. NM_001381105.1 → NP_001366743.1  Secreted protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q19191

    9. NM_001270227.4 → NP_001257156.1  Secreted protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001257156.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2R5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q19191.2

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