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    C04F5.8 Methyltransferase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178898, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C04F5.8
    Official Full Name
    Methyltransferase domain-containing protein
    Primary source
    WormBase:WBGene00015450
    Locus tag
    CELE_C04F5.8
    See related
    AllianceGenome:WB:WBGene00015450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable methyltransferase activity. Predicted to be involved in tRNA (guanine-N7)-methylation. Is expressed in hypodermis; intestine; and pharynx. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C04F5.8 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (5111518..5113754, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Serpentine Receptor, class AB (class A-like) Neighboring gene glucuronosyltransferase Neighboring gene C2H2-type domain-containing protein Neighboring gene Systemic RNA interference defective protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables tRNA (guanine(46)-N7)-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in tRNA (guanine-N7)-methylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in tRNA modification IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Methyltransferase domain-containing protein
    NP_504370.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      5111518..5113754 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071969.8 → NP_504370.2  Methyltransferase domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9GZD0
      Conserved Domains (1) summary
      pfam12847
      Location:172 → 281
      Methyltransf_18; Methyltransferase domain
    Nucleotide Protein
    Heading Accession and Version

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