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    Y17G7B.8 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 189455, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y17G7B.8
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00012462
    Locus tag
    CELE_Y17G7B.8
    See related
    AllianceGenome:WB:WBGene00012462
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in innate immune response. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y17G7B.8 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (12025887..12027747, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Activin_recp domain-containing protein;DUF281 domain-containing protein Neighboring gene DNA replication licensing factor MCM2 Neighboring gene Globin domain-containing protein Neighboring gene ncRNA Neighboring gene RNA exonuclease 4 Neighboring gene Spliceosome-associated protein CWC27 homolog Neighboring gene Triosephosphate isomerase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence of glutathione transferase complexing and signaling in the model nematode Caenorhabditis elegans using a pull-down proteomic assay. Greetham D, et al. Proteomics, 2004 Jul. PMID 15221760
    2. A conserved role for a GATA transcription factor in regulating epithelial innate immune responses. Shapira M, et al. Proc Natl Acad Sci U S A, 2006 Sep 19. PMID 16968778, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in innate immune response HEP PubMed 

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_496561.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      12025887..12027747 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064160.2 → NP_496561.1  F-box domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496561.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XXI8
      Conserved Domains (1) summary
      pfam00646
      Location:6 → 51
      F-box; F-box domain
    Nucleotide Protein
    Heading Accession and Version

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