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    Metallopeptidase M24 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819699, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Metallopeptidase M24 family protein
    Primary source
    TAIR:AT3G05350
    Locus tag
    AT3G05350
    See related
    Araport:AT3G05350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T12H1.32; T12H1_32
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    13
    Sequence:
    Chromosome: 3; NC_003074.8 (1526963..1533909, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene cyclin family Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene receptor like protein 30 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene receptor like protein 31

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Peltier JB, et al. Mol Cell Proteomics, 2006 Jan. PMID 16207701
    2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
    3. Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Rutschow H, et al. Plant Physiol, 2008 Sep. PMID 18633119, Free PMC Article
    4. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
    5. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_111408.7

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables metalloaminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast stroma HDA PubMed 
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    Metallopeptidase M24 family protein
    NP_187186.5
    • Metallopeptidase M24 family protein; FUNCTIONS IN: hydrolase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Creatinase (InterPro:IPR000587); BEST Arabidopsis thaliana protein match is: aminopeptidase P1 (TAIR:AT4G36760.1); Has 11788 Blast hits to 11217 proteins in 2602 species: Archae - 275; Bacteria - 7526; Metazoa - 334; Fungi - 310; Plants - 154; Viruses - 0; Other Eukaryotes - 3189 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1526963..1533909 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111408.7 → NP_187186.5  Metallopeptidase M24 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187186.5

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RY11, Q9MA84
      UniProtKB/TrEMBL
      A0A178VBL2
      Conserved Domains (4) summary
      cd01085
      Location:419 → 643
      APP; X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, ...
      pfam01321
      Location:96 → 206
      Creatinase_N; Creatinase/Prolidase N-terminal domain
      pfam16188
      Location:646 → 707
      Peptidase_M24_C; C-terminal region of peptidase_M24
      pfam16189
      Location:230 → 416
      Creatinase_N_2; Creatinase/Prolidase N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RY11.1

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