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    BGAL1 beta galactosidase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820584, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BGAL1
    Official Full Name
    beta galactosidase 1
    Primary source
    TAIR:AT3G13750
    Locus tag
    AT3G13750
    See related
    Araport:AT3G13750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    beta galactosidase 1; beta-galactosidase 1
    Summary
    beta-galactosidase, glycosyl hydrolase family 35
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    Genomic context

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    See BGAL1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    19
    Sequence:
    Chromosome: 3; NC_003074.8 (4510965..4516478)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribonuclease III family protein Neighboring gene ncRNA Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative characterization of the Arabidopsis subfamily a1 beta-galactosidases. Gantulga D, et al. Phytochemistry, 2009 Dec. PMID 19767039
    2. Subcellular location of Arabidopsis thaliana subfamily a1 β-galactosidases and developmental regulation of transcript levels of their coding genes. Moneo-Sánchez M, et al. Plant Physiol Biochem, 2016 Dec. PMID 27676245
    3. Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. Boudart G, et al. Proteomics, 2005 Jan. PMID 15593128
    4. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article
    5. Profiling of the Receptor for Activated C Kinase 1a (RACK1a) interaction network in Arabidopsis thaliana. Guo J, et al. Biochem Biophys Res Commun, 2019 Dec 3. PMID 31606202

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_112225.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables beta-galactosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type cell wall HDA PubMed 
    located_in plant-type cell wall IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    beta galactosidase 1
    NP_187988.1
    • beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4510965..4516478
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112225.5 → NP_187988.1  beta galactosidase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187988.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56W18, Q8RWC1, Q9SCW1
      UniProtKB/TrEMBL
      A0A5S9XBU5, A0A654F868
      Conserved Domains (3) summary
      PLN03059
      Location:10 → 847
      PLN03059; beta-galactosidase; Provisional
      pfam01301
      Location:40 → 344
      Glyco_hydro_35; Glycosyl hydrolases family 35
      pfam02140
      Location:769 → 846
      Gal_Lectin; Galactose binding lectin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SCW1.1

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