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    G-type lectin S-receptor-like Serine/Threonine-kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828018, updated on 18-Sep-2024

    Summary

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    Official Full Name
    G-type lectin S-receptor-like Serine/Threonine-kinase
    Primary source
    TAIR:AT4G03230
    Locus tag
    AT4G03230
    See related
    Araport:AT4G03230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4C21.16; F4C21_16
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (1418841..1423337, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Coproporphyrinogen III oxidase Neighboring gene xyloglucan endotransglucosylase/hydrolase 9 Neighboring gene Protein with RNI-like/FBD-like domain Neighboring gene Homeodomain-like superfamily protein Neighboring gene frataxin-like protein Neighboring gene Outer arm dynein light chain 1 protein Neighboring gene Cyclin D6;1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Independent S-locus mutations caused self-fertility in Arabidopsis thaliana. Boggs NA, et al. PLoS Genet, 2009 Mar. PMID 19300485, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001340438.1
    NM_001340439.1
    NM_001340440.1
    NM_116561.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in recognition of pollen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    G-type lectin S-receptor-like Serine/Threonine-kinase
    NP_192232.5
    • S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      1418841..1423337 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340435.1 → NP_001329566.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V611, A0A1P8B837

    2. NM_001340434.1 → NP_001329567.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V611, A0A1P8B844

    3. NM_001340437.1 → NP_001329570.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V611, A0A1P8B840

    4. NM_001340436.1 → NP_001329571.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V611, A0A1P8B838
      Conserved Domains (5) summary
      cd01098
      Location:339 → 425
      PAN_AP_plant; Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and ...
      cd14066
      Location:696 → 961
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam00954
      Location:210 → 319
      S_locus_glycop; S-locus glycoprotein domain
      pfam01453
      Location:79 → 178
      B_lectin; D-mannose binding lectin
      pfam11883
      Location:964 → 1010
      DUF3403; Domain of unknown function (DUF3403)

    5. NM_116561.6 → NP_192232.5  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192232.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V611, A0A1P8B838
      Conserved Domains (5) summary
      cd01098
      Location:339 → 425
      PAN_AP_plant; Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and ...
      cd14066
      Location:696 → 961
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam00954
      Location:210 → 319
      S_locus_glycop; S-locus glycoprotein domain
      pfam01453
      Location:79 → 178
      B_lectin; D-mannose binding lectin
      pfam11883
      Location:964 → 1010
      DUF3403; Domain of unknown function (DUF3403)

    6. NM_001340438.1 → NP_001329569.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V611, A0A1P8B844

    7. NM_001340439.1 → NP_001329568.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V611, A0A1P8B859

    8. NM_001340440.1 → NP_001329572.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JI70, Q9ZR08
      UniProtKB/TrEMBL
      A0A178V611
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZR08.3

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