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    Metallo-hydrolase/oxidoreductase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825661, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Metallo-hydrolase/oxidoreductase superfamily protein
    Primary source
    TAIR:AT4G03610
    Locus tag
    AT4G03610
    See related
    Araport:AT4G03610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5L23.10; T5L23_10
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (1604886..1607496)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Cystatin/monellin superfamily protein Neighboring gene pyrroline-5-carboxylate reductase Neighboring gene myosin heavy chain-like protein Neighboring gene F-box/LRR protein Neighboring gene RNI-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NM_001203741.1
    NM_116599.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Metallo-hydrolase/oxidoreductase superfamily protein
    NP_001190670.1
    • Metallo-hydrolase/oxidoreductase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT1G30300.1).
    NP_192270.4
    • Metallo-hydrolase/oxidoreductase superfamily protein; BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT1G30300.1); Has 2341 Blast hits to 2330 proteins in 693 species: Archae - 12; Bacteria - 1231; Metazoa - 0; Fungi - 21; Plants - 106; Viruses - 0; Other Eukaryotes - 971 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      1604886..1607496
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340465.1 → NP_001328740.1  Metallo-hydrolase/oxidoreductase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B5K7, Q9SY39

    2. NM_001340466.1 → NP_001328741.1  Metallo-hydrolase/oxidoreductase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UX46, A0A1P8B5J8

    3. NM_001203741.1 → NP_001190670.1  Metallo-hydrolase/oxidoreductase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190670.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UX46, F4JGA5
      Conserved Domains (2) summary
      COG1235
      Location:13 → 279
      PhnP; Phosphoribosyl 1,2-cyclic phosphodiesterase [Inorganic ion transport and metabolism]
      cd16279
      Location:13 → 246
      metallo-hydrolase-like_MBL-fold; uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo

    4. NM_116599.5 → NP_192270.4  Metallo-hydrolase/oxidoreductase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192270.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UX46, F4JGA4
      Conserved Domains (2) summary
      COG1235
      Location:13 → 281
      PhnP; Phosphoribosyl 1,2-cyclic phosphodiesterase [Inorganic ion transport and metabolism]
      cd16279
      Location:13 → 231
      metallo-hydrolase-like_MBL-fold; uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo
    Nucleotide Protein
    Heading Accession and Version

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