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    Fam114a1 family with sequence similarity 114, member A1 [ Mus musculus (house mouse) ]

    Gene ID: 68303, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fam114a1provided by MGI
    Official Full Name
    family with sequence similarity 114, member A1provided by MGI
    Primary source
    MGI:MGI:1915553
    See related
    Ensembl:ENSMUSG00000029185 AllianceGenome:MGI:1915553
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Noxp20; 1190001N04Rik; 9130005N14Rik
    Summary
    Acts upstream of or within several processes, including angiotensin-activated signaling pathway; fibroblast activation; and fibroblast migration. Predicted to be located in Golgi apparatus; cytosol; and nucleoplasm. Is expressed in Meckel's cartilage and cranium. Orthologous to human FAM114A1 (family with sequence similarity 114 member A1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in bladder adult (RPKM 26.5), limb E14.5 (RPKM 22.0) and 26 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Fam114a1 in Genome Data Viewer
    Location:
    5 C3.1; 5 33.55 cM
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (65127459..65199217)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (64970075..65041901)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_13250 Neighboring gene toll-like receptor 1 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E1051 Neighboring gene toll-like receptor 1 Neighboring gene STARR-positive B cell enhancer ABC_E2745 Neighboring gene STARR-positive B cell enhancer ABC_E2158 Neighboring gene toll-like receptor 6 Neighboring gene STARR-seq mESC enhancer starr_13253 Neighboring gene microRNA 574 Neighboring gene STARR-seq mESC enhancer starr_13254 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:65397377-65397486 Neighboring gene predicted gene, 32374 Neighboring gene STARR-seq mESC enhancer starr_13256 Neighboring gene transmembrane protein 156 Neighboring gene STARR-seq mESC enhancer starr_13258 Neighboring gene STARR-seq mESC enhancer starr_13259 Neighboring gene kelch-like 5 Neighboring gene predicted gene, 54287

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC117924

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein Noxp20
    Names
    nervous system over-expressed protein 20
    nervous system overexpressed protein 20

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026667.4NP_080943.3  protein Noxp20

      See identical proteins and their annotated locations for NP_080943.3

      Status: VALIDATED

      Source sequence(s)
      AC124428, AC161757
      Consensus CDS
      CCDS19304.1
      UniProtKB/Swiss-Prot
      Q8BMQ0, Q8R2U1, Q9D281, Q9D3K6
      Related
      ENSMUSP00000031080.9, ENSMUST00000031080.15
      Conserved Domains (1) summary
      pfam05334
      Location:126300
      DUF719; Protein of unknown function (DUF719)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      65127459..65199217
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)