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    bZIP transcription factor (DUF630 and DUF632) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817251, updated on 18-Sep-2024

    Summary

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    Official Full Name
    bZIP transcription factor (DUF630 and DUF632)
    Primary source
    TAIR:AT2G27090
    Locus tag
    AT2G27090
    See related
    Araport:AT2G27090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T20P8.14; T20P8_14
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (11567436..11571903, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene response regulator 13 Neighboring gene Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Neighboring gene C2H2 zinc-finger protein SERRATE (SE) Neighboring gene FAR1-related sequence 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Nühse TS, et al. Mol Cell Proteomics, 2003 Nov. PMID 14506206
    2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001336101.1
    NM_128267.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    bZIP transcription factor (DUF630 and DUF632)
    NP_180277.1
    • Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT4G39790.1); Has 977 Blast hits to 876 proteins in 150 species: Archae - 2; Bacteria - 21; Metazoa - 160; Fungi - 127; Plants - 553; Viruses - 15; Other Eukaryotes - 99 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11567436..11571903 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128267.5 → NP_180277.1  bZIP transcription factor (DUF630 and DUF632) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180277.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VN93, Q9ZVD1
      Conserved Domains (2) summary
      pfam04782
      Location:309 → 650
      DUF632; Protein of unknown function (DUF632)
      pfam04783
      Location:1 → 59
      DUF630; Protein of unknown function (DUF630)

    2. NM_001336101.1 → NP_001324823.1  bZIP transcription factor (DUF630 and DUF632) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VN93, Q9ZVD1
      Conserved Domains (2) summary
      pfam04782
      Location:309 → 650
      DUF632; Protein of unknown function (DUF632)
      pfam04783
      Location:1 → 59
      DUF630; Protein of unknown function (DUF630)
    Nucleotide Protein
    Heading Accession and Version

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