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    DUF581 family protein, putative (DUF581) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817110, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DUF581 family protein, putative (DUF581)
    Primary source
    TAIR:AT2G25690
    Locus tag
    AT2G25690
    See related
    Araport:AT2G25690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3N11.14; F3N11_14
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (10940071..10942454, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene SCR-like 17 Neighboring gene miscRNA Neighboring gene SKP1-like 3 Neighboring gene holocarboxylase synthase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The FCS-like zinc finger scaffold of the kinase SnRK1 is formed by the coordinated actions of the FLZ domain and intrinsically disordered regions. Jamsheer K M, et al. J Biol Chem, 2018 Aug 24. PMID 29945970, Free PMC Article
    2. Expression of Arabidopsis FCS-Like Zinc finger genes is differentially regulated by sugars, cellular energy level, and abiotic stress. Jamsheer K M, et al. Front Plant Sci, 2015. PMID 26442059, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036338.1
    NM_001336010.1
    NM_128128.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in response to salt IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to starvation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DUF581 family protein, putative (DUF581)
    NP_001031415.1
    • Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G11460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_180140.1
    • Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G11460.1); Has 500 Blast hits to 500 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 500; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10940071..10942454 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128128.4 → NP_180140.1  DUF581 family protein, putative (DUF581) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180140.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SL94
      UniProtKB/TrEMBL
      A0A5S9X1N3, A0A654F144
      Conserved Domains (1) summary
      pfam04570
      Location:256 → 307
      zf-FLZ; zinc-finger of the FCS-type, C2-C2

    2. NM_001336010.1 → NP_001323451.1  DUF581 family protein, putative (DUF581) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AX29, A0A5S9X1N3

    3. NM_001036338.1 → NP_001031415.1  DUF581 family protein, putative (DUF581) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031415.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SL94
      UniProtKB/TrEMBL
      A0A5S9X1N3, A0A654F144
      Conserved Domains (1) summary
      pfam04570
      Location:256 → 307
      zf-FLZ; zinc-finger of the FCS-type, C2-C2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SL94.1

    Gene LinkOut

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