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    ARM repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841558, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ARM repeat superfamily protein
    Primary source
    TAIR:AT1G51350
    Locus tag
    AT1G51350
    See related
    Araport:AT1G51350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F11M15.21; F11M15_21
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (19035644..19039398)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Serine protease inhibitor (SERPIN) family protein Neighboring gene MATE efflux family protein Neighboring gene cyclin-dependent kinase inhibitor SMR3-like protein Neighboring gene dimeric A/B barrel domainS-protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_104013.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ARM repeat superfamily protein
    NP_175546.1
    • ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 1374 Blast hits to 1058 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 493; Fungi - 490; Plants - 280; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19035644..19039398
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104013.3 → NP_175546.1  ARM repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175546.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W620, A0A5S9WLB0, Q8RWE7
      Conserved Domains (4) summary
      COG5064
      Location:62 → 210
      SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
      COG5369
      Location:195 → 656
      COG5369; Uncharacterized conserved protein [Function unknown]
      sd00044
      Location:365 → 397
      HEAT; HEAT repeat [structural motif]
      sd00043
      Location:410 → 434
      ARM; armadillo repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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