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    ERD7 Senescence/dehydration-associated protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816293, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ERD7
    Official Full Name
    Senescence/dehydration-associated protein-like protein
    Primary source
    TAIR:AT2G17840
    Locus tag
    AT2G17840
    See related
    Araport:AT2G17840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EARLY-RESPONSIVE TO DEHYDRATION 7; T13L16.14; T13L16_14
    Summary
    Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.
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    Genomic context

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    See ERD7 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (7755605..7757929, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene histidine kinase 1 Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene Rhodanese/Cell cycle control phosphatase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phosphorylation of Thr-225 and Ser-262 on ERD7 Promotes Age-Dependent and Stress-Induced Leaf Senescence through the Regulation of Hydrogen Peroxide Accumulation in Arabidopsis thaliana. Wu R, et al. Int J Mol Sci, 2024 Jan 22. PMID 38279327, Free PMC Article
    2. EARLY RESPONSE TO DEHYDRATION 7 Remodels Cell Membrane Lipid Composition during Cold Stress in Arabidopsis. Barajas-Lopez JD, et al. Plant Cell Physiol, 2021 Mar 25. PMID 33165601
    3. Comparative transcriptome of diurnally oscillating genes and hormone-responsive genes in Arabidopsis thaliana: insight into circadian clock-controlled daily responses to common ambient stresses in plants. Mizuno T, et al. Plant Cell Physiol, 2008 Mar. PMID 18202002
    4. Identification of Arabidopsis genes regulated by high light-stress using cDNA microarray. Kimura M, et al. Photochem Photobiol, 2003 Feb. PMID 12785063
    5. Cloning of cDNAs for genes that are early-responsive to dehydration stress (ERDs) in Arabidopsis thaliana L.: identification of three ERDs as HSP cognate genes. Kiyosue T, et al. Plant Mol Biol, 1994 Aug. PMID 8075396

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Phosphorylation of Thr-225 and Ser-262 on ERD7 Promotes Age-Dependent and Stress-Induced Leaf Senescence through the Regulation of Hydrogen Peroxide Accumulation in Arabidopsis thaliana.
      Title: Phosphorylation of Thr-225 and Ser-262 on ERD7 Promotes Age-Dependent and Stress-Induced Leaf Senescence through the Regulation of Hydrogen Peroxide Accumulation in Arabidopsis thaliana.
    2. EARLY RESPONSE TO DEHYDRATION 7 Remodels Cell Membrane Lipid Composition during Cold Stress in Arabidopsis.
      Title: EARLY RESPONSE TO DEHYDRATION 7 Remodels Cell Membrane Lipid Composition during Cold Stress in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001335562.1
    NM_127337.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in circadian rhythm IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to cold IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to high light intensity IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to water deprivation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    Senescence/dehydration-associated protein-like protein
    NP_179374.1
    • EARLY-RESPONSIVE TO DEHYDRATION 7 (ERD7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to high light intensity, response to salt stress, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT4G35985.1); Has 250 Blast hits to 250 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 39; Plants - 134; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7755605..7757929 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127337.3 → NP_179374.1  Senescence/dehydration-associated protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179374.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48832, Q8LA30, Q94II1
      UniProtKB/TrEMBL
      A0A178VW80, A0A5S9WZ55
      Conserved Domains (1) summary
      pfam06911
      Location:258 → 426
      Senescence; Senescence-associated protein

    2. NM_001335562.1 → NP_001323840.1  Senescence/dehydration-associated protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AYB1, A0A5S9WZ55
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O48832.1

    Gene LinkOut

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