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    WAPL (Wings apart-like protein regulation of heterochromatin) protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837647, updated on 18-Sep-2024

    Summary

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    Official Full Name
    WAPL (Wings apart-like protein regulation of heterochromatin) protein
    Primary source
    TAIR:AT1G11060
    Locus tag
    AT1G11060
    See related
    Araport:AT1G11060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtWAPL1; T19D16.5; T19D16_5; WAPL1; Wings apart-like protein 1
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    13
    Sequence:
    Chromosome: 1; NC_003070.9 (3684568..3689892)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene HSP40/DnaJ peptide-binding protein Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene serine carboxypeptidase-like 31

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Opposing Actions of Arabidopsis CHROMOSOME TRANSMISSION FIDELITY7 and WINGS APART-LIKE1 and 2 Differ in Mitotic and Meiotic Cells. De K, et al. Plant Cell, 2016 Feb. PMID 26813623, Free PMC Article
    2. Arabidopsis thaliana WAPL is essential for the prophase removal of cohesin during meiosis. De K, et al. PLoS Genet, 2014 Jul. PMID 25033056, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. we show that mutations in AtWAPL suppress the lethality associated with inactivation of AtCTF7.
      Title: Arabidopsis thaliana WAPL is essential for the prophase removal of cohesin during meiosis.
    Submit: New GeneRIF Correction

    General gene information

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    NM_100979.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA repair IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within embryo development ending in seed dormancy IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within meiotic chromosome segregation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in meiotic sister chromatid cohesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within meiotic sister chromatid cohesion involved in meiosis I IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in meiotic sister chromatid segregation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in mitotic sister chromatid cohesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within mitotic sister chromatid segregation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    WAPL (Wings apart-like protein regulation of heterochromatin) protein
    NP_172573.2
    • WAPL (Wings apart-like protein regulation of heterochromatin) protein; BEST Arabidopsis thaliana protein match is: WAPL (Wings apart-like protein regulation of heterochromatin) protein (TAIR:AT1G61030.1); Has 319 Blast hits to 253 proteins in 105 species: Archae - 2; Bacteria - 73; Metazoa - 168; Fungi - 7; Plants - 48; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3684568..3689892
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100979.4 → NP_172573.2  WAPL (Wings apart-like protein regulation of heterochromatin) protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172573.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I7C7, O04085
      UniProtKB/TrEMBL
      A0A654EAS4
      Conserved Domains (1) summary
      pfam07814
      Location:151 → 518
      WAPL; Wings apart-like protein regulation of heterochromatin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4I7C7.1

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