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    MYB10 myb domain protein 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820464, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MYB10
    Official Full Name
    myb domain protein 10
    Primary source
    TAIR:AT3G12820
    Locus tag
    AT3G12820
    See related
    Araport:AT3G12820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtMYB10; myb domain protein 10
    Summary
    Member of the R2R3 factor gene family.
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    Genomic context

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    See MYB10 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (4073855..4075643, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme family protein Neighboring gene phosphoglycerate kinase 1 Neighboring gene short-chain dehydrogenase-reductase B Neighboring gene SNF2 domain-containing protein / helicase domain-containing protein Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MYB10 and MYB72 are required for growth under iron-limiting conditions. Palmer CM, et al. PLoS Genet, 2013 Nov. PMID 24278034, Free PMC Article
    2. The transcription factor bZIP44 cooperates with MYB10 and MYB72 to regulate the response of Arabidopsis thaliana to iron deficiency stress. Wu X, et al. New Phytol, 2024 Jun. PMID 38523234
    3. Towards functional characterisation of the members of the R2R3-MYB gene family from Arabidopsis thaliana. Kranz HD, et al. Plant J, 1998 Oct. PMID 9839469
    4. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
    5. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001338009.1
    NM_112118.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of gene expression IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to absence of light IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to ethylene IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to iron ion starvation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to iron ion starvation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to zinc ion ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in stress response to nickel ion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myb domain protein 10
    NP_187888.1
    • myb domain protein 10 (MYB10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of transcription, DNA-dependent; EXPRESSED IN: shoot apex, hypocotyl, sepal, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 58 (TAIR:AT1G16490.1); Has 9041 Blast hits to 8235 proteins in 510 species: Archae - 0; Bacteria - 0; Metazoa - 871; Fungi - 478; Plants - 5872; Viruses - 6; Other Eukaryotes - 1814 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4073855..4075643 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112118.3 → NP_187888.1  myb domain protein 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187888.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LTV4, Q9ZTF3
      UniProtKB/TrEMBL
      A0A5S9XBG9, A0A654F6J6
      Conserved Domains (1) summary
      PLN03091
      Location:1 → 121
      PLN03091; hypothetical protein; Provisional

    2. NM_001338009.1 → NP_001325605.1  myb domain protein 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VK46, A0A1I9LLR4, A0A384L5V9
      Conserved Domains (1) summary
      PLN03091
      Location:2 → 73
      PLN03091; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LTV4.1

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