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    Prolyl oligopeptidase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838626, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Prolyl oligopeptidase family protein
    Primary source
    TAIR:AT1G20380
    Locus tag
    AT1G20380
    See related
    Araport:AT1G20380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14O10.2; F14O10_2
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (7061442..7065242)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Pseudouridine synthase family protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene hypothetical protein (DUF1204)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Parallel evolution of the POQR prolyl oligo peptidase gene conferring plant quantitative disease resistance. Badet T, et al. PLoS Genet, 2017 Dec. PMID 29272270, Free PMC Article
    2. A possible role of prolyl oligopeptidase during Linum usitatissimum (flax) seed development. Gutierrez L, et al. Plant Biol (Stuttg), 2008 May. PMID 18426487
    3. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. seed expression not specific to early development
      Title: A possible role of prolyl oligopeptidase during Linum usitatissimum (flax) seed development.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_101889.2

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response to fungus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Prolyl oligopeptidase family protein
    NP_173463.1
    • Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G76140.1); Has 7989 Blast hits to 7898 proteins in 1359 species: Archae - 93; Bacteria - 3809; Metazoa - 313; Fungi - 45; Plants - 231; Viruses - 0; Other Eukaryotes - 3498 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7061442..7065242
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332444.1 → NP_001321031.1  Prolyl oligopeptidase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WL42, A0A1P8APL9

    2. NM_101889.2 → NP_173463.1  Prolyl oligopeptidase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173463.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9V965, A0A654EGJ7, F4HSS5
      Conserved Domains (2) summary
      COG1505
      Location:31 → 726
      PreP; Prolyl oligopeptidase PreP, S9A serine peptidase family [Amino acid transport and metabolism]
      pfam00326
      Location:496 → 723
      Peptidase_S9; Prolyl oligopeptidase family
    Nucleotide Protein
    Heading Accession and Version

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