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    RABG3A RAB GTPase homolog G3A [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826558, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RABG3A
    Official Full Name
    RAB GTPase homolog G3A
    Primary source
    TAIR:AT4G09720
    Locus tag
    AT4G09720
    See related
    Araport:AT4G09720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATRABG3A; F17A8.70; F17A8_70; RAB GTPase homolog G3A
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    Genomic context

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    See RABG3A in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (6132837..6135701)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene RH39 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article
    2. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001160745.1
    NM_001203765.1
    NM_001340630.1
    NM_001340631.1
    NM_117040.4
    NM_179016.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    RAB GTPase homolog G3A
    NP_001154217.1
    • RAB GTPase homolog G3A (RABG3A); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578), Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase (InterPro:IPR020851); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3B (TAIR:AT1G22740.1); Has 24309 Blast hits to 24289 proteins in 701 species: Archae - 21; Bacteria - 115; Metazoa - 12641; Fungi - 3212; Plants - 2866; Viruses - 20; Other Eukaryotes - 5434 (source: NCBI BLink).
    NP_001190694.1
    • RAB GTPase homolog G3A (RABG3A); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3B (TAIR:AT1G22740.1).
    NP_001319888.1
    • RAB GTPase homolog G3A (RABG3A); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3B (TAIR:AT1G22740.1); Has 21151 Blast hits to 21132 proteins in 621 species: Archae - 2; Bacteria - 58; Metazoa - 10222; Fungi - 3236; Plants - 2728; Viruses - 20; Other Eukaryotes - 4885 (source: NCBI BLink).
    NP_192710.1
    • RAB GTPase homolog G3A (RABG3A); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3B (TAIR:AT1G22740.1); Has 25661 Blast hits to 25639 proteins in 719 species: Archae - 36; Bacteria - 127; Metazoa - 13221; Fungi - 3843; Plants - 2827; Viruses - 20; Other Eukaryotes - 5587 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      6132837..6135701
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203765.1 → NP_001190694.1  RAB GTPase homolog G3A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190694.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JKR7
      Conserved Domains (2) summary
      smart00175
      Location:9 → 184
      RAB; Rab subfamily of small GTPases
      cd01862
      Location:9 → 187
      Rab7; Rab GTPase family 7 (Rab7)

    2. NM_001340631.1 → NP_001328831.1  RAB GTPase homolog G3A [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUR6
      Conserved Domains (1) summary
      cl38936
      Location:2 → 148
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    3. NM_001340630.1 → NP_001319888.1  RAB GTPase homolog G3A [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUR6
      Conserved Domains (1) summary
      cl38936
      Location:2 → 148
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    4. NM_117040.4 → NP_192710.1  RAB GTPase homolog G3A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192710.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A2RVP8, Q3EA61, Q948K8, Q9SZ88
      UniProtKB/TrEMBL
      A0A178UUI2, A0A5S9XRL4
      Conserved Domains (1) summary
      cd01862
      Location:9 → 182
      Rab7; Rab GTPase family 7 (Rab7)

    5. NM_001160745.1 → NP_001154217.1  RAB GTPase homolog G3A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154217.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JKR6
      Conserved Domains (2) summary
      smart00175
      Location:9 → 190
      RAB; Rab subfamily of small GTPases
      cd01862
      Location:9 → 193
      Rab7; Rab GTPase family 7 (Rab7)

    6. NM_179016.1 → NP_849347.1  RAB GTPase homolog G3A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849347.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUR6
      Conserved Domains (1) summary
      cl38936
      Location:2 → 148
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q948K8.1

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