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    GHMP kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831298, updated on 18-Sep-2024

    Summary

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    Official Full Name
    GHMP kinase family protein
    Primary source
    TAIR:AT5G14470
    Locus tag
    AT5G14470
    See related
    Araport:AT5G14470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtGALK2; F18O22.260; F18O22_260; galactokinase 2; GALK2
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (4662775..4664681, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Surfeit locus protein 2 (SURF2) Neighboring gene ncRNA Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene Pseudouridine synthase family protein Neighboring gene beta-1,4-N-acetylglucosaminyltransferase family protein Neighboring gene NAC domain containing protein 85

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AHL-Priming Protein 1 mediates N-3-oxo-tetradecanoyl-homoserine lactone priming in Arabidopsis. Shrestha A, et al. BMC Biol, 2022 Dec 5. PMID 36464707, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glucuronokinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in host interaction involved in quorum sensing IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GHMP kinase family protein
    NP_196951.3
    • GHMP kinase family protein; FUNCTIONS IN: kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding; INVOLVED IN: metabolic process, phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: inflorescence meristem, flower, carpel, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: glucuronokinase G (TAIR:AT3G01640.1); Has 369 Blast hits to 369 proteins in 134 species: Archae - 34; Bacteria - 179; Metazoa - 12; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4662775..4664681 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121451.5 → NP_196951.3  GHMP kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196951.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q5PP60, Q9LY82
      UniProtKB/TrEMBL
      A0A178URH8, A0A5S9Y437, A0A654G1M7
      Conserved Domains (1) summary
      cl40722
      Location:20 → 345
      COG2605; Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LY82.1

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