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    phosphatidylinositol 4-kinase gamma-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832491, updated on 18-Sep-2024

    Summary

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    Official Full Name
    phosphatidylinositol 4-kinase gamma-like protein
    Primary source
    TAIR:AT5G24240
    Locus tag
    AT5G24240
    See related
    Araport:AT5G24240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MOP9.5; MOP9_5
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (8230916..8234150, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Lipase class 3-related protein Neighboring gene Lipase class 3-related protein Neighboring gene prolyl oligopeptidase family protein Neighboring gene Calcium-binding EF-hand family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Role of Arabidopsis AtPI4Kγ3, a type II phosphoinositide 4-kinase, in abiotic stress responses and floral transition. Akhter S, et al. Plant Biotechnol J, 2016 Jan. PMID 25879253, Free PMC Article
    2. Proteomic analysis of leaf peroxisomal proteins in greening cotyledons of Arabidopsis thaliana. Fukao Y, et al. Plant Cell Physiol, 2002 Jul. PMID 12154131
    3. Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. Ito J, et al. J Proteome Res, 2011 Apr 1. PMID 21166475
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AtPI4Kgamma3 is necessary for reinforcement of plant response to abiotic stresses and delay of the floral transition. [AtPI4Kgamma3]
      Title: Role of Arabidopsis AtPI4Kγ3, a type II phosphoinositide 4-kinase, in abiotic stress responses and floral transition.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    NM_001343856.1
    NM_122330.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol 4-kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables phosphatidylinositol binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of flower development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to abscisic acid IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in peroxisome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylinositol 4-kinase gamma-like protein
    NP_001318634.1
    • Phosphatidylinositol 3- and 4-kinase; Ubiquitin family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor; LOCATED IN: peroxisome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: phosphoinositide 4-kinase gamma 4 (TAIR:AT2G46500.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      8230916..8234150 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343856.1 → NP_001318634.1  phosphatidylinositol 4-kinase gamma-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FNF8
      UniProtKB/TrEMBL
      A0A5S9Y6R5, A0A654G3N1
      Conserved Domains (3) summary
      cd17039
      Location:111 → 180
      Ubl_ubiquitin_like; ubiquitin-like (Ubl) domain found in ubiquitin and ubiquitin-like Ubl proteins
      pfam00454
      Location:266 → 521
      PI3_PI4_kinase; Phosphatidylinositol 3- and 4-kinase
      cl28922
      Location:34 → 105
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    2. NM_122330.2 → NP_197812.1  phosphatidylinositol 4-kinase gamma-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197812.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FNF8
      UniProtKB/TrEMBL
      A0A5S9Y6R5, A0A654G3N1
      Conserved Domains (3) summary
      cd17039
      Location:111 → 180
      Ubl_ubiquitin_like; ubiquitin-like (Ubl) domain found in ubiquitin and ubiquitin-like Ubl proteins
      pfam00454
      Location:266 → 521
      PI3_PI4_kinase; Phosphatidylinositol 3- and 4-kinase
      cl28922
      Location:34 → 105
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FNF8.1

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