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    spata2l spermatogenesis associated 2-like [ Danio rerio (zebrafish) ]

    Gene ID: 100003387, updated on 9-Dec-2024

    Summary

    Official Symbol
    spata2lprovided by ZNC
    Official Full Name
    spermatogenesis associated 2-likeprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070705-402
    See related
    AllianceGenome:ZFIN:ZDB-GENE-070705-402
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:dkey-238o13.3
    Summary
    Predicted to be active in cytoplasm. Orthologous to human SPATA2L (spermatogenesis associated 2 like). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See spata2l in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (14684107..14688438)
    105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (14715609..14719926)

    Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene UTP4 small subunit processome component Neighboring gene VPS9 domain containing 1 Neighboring gene si:dkey-238o13.4 Neighboring gene peptide deformylase, mitochondrial Neighboring gene URI1 prefoldin like chaperone

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    spermatogenesis associated 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001386847.1NP_001373776.1  spermatogenesis associated 2-like

      Status: VALIDATED

      Source sequence(s)
      CT025859
      UniProtKB/TrEMBL
      A0A8M6Z232

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007129.7 Reference GRCz11 Primary Assembly

      Range
      14684107..14688438
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)