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    fam133b family with sequence similarity 133 member B [ Danio rerio (zebrafish) ]

    Gene ID: 790942, updated on 9-Dec-2024

    Summary

    Official Symbol
    fam133bprovided by ZNC
    Official Full Name
    family with sequence similarity 133 member Bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060503-229
    See related
    Ensembl:ENSDARG00000013863 AllianceGenome:ZFIN:ZDB-GENE-060503-229
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    FAM133; wu:fc17e01; zgc:153800; si:ch211-287b5.3
    Summary
    Orthologous to several human genes including FAM133A (family with sequence similarity 133 member A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See fam133b in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (40337554..40347943)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (40750441..40760823)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene granulin antisense Neighboring gene granulin a, tandem duplicate 2 Neighboring gene cyclin dependent kinase 6 Neighboring gene HEPACAM family member 2 Neighboring gene VPS50 EARP/GARPII complex subunit

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001080087.1NP_001073556.1  protein FAM133

      See identical proteins and their annotated locations for NP_001073556.1

      Status: PROVISIONAL

      Source sequence(s)
      BC128660
      UniProtKB/Swiss-Prot
      A1A5I1
      Related
      ENSDARP00000083980.4, ENSDART00000089547.6

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      40337554..40347943
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021468140.2XP_021323815.1  protein FAM133 isoform X1

      UniProtKB/TrEMBL
      A0A8M9PRU0
      Related
      ENSDARP00000119134.1, ENSDART00000140857.3

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395058.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      557..2606
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)