ywhaba tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ywhabaprovided by ZNC
Official Full Name: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-6583
See related: Ensembl:ENSDARG00000013078 AllianceGenome:ZFIN:ZDB-GENE-030131-6583
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: ywhab1; fb80c08; fk41f08; wu:fb80c08; wu:fd11d01; wu:fk41f08
Summary: Acts upstream of or within phagocytosis, engulfment. Predicted to be active in cytoplasm. Is expressed in several structures, including nervous system; optic vesicle; otic vesicle; solid lens vesicle; and tail bud. Orthologous to human YWHAB (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 6

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	6	NC_007117.7 (52212574..52222955)
105	previous assembly	GRCz10 (GCF_000002035.5)	6	NC_007117.6 (52212575..52222956)

Chromosome 6 - NC_007117.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Identification of the 14-3-3 beta/alpha-A protein as a novel maternal peptidoglycan-binding protein that protects embryos of zebrafish against bacterial infections.
Title: Identification of the 14-3-3 β/α-A protein as a novel maternal peptidoglycan-binding protein that protects embryos of zebrafish against bacterial infections.

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General gene information

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Markers

fj27e06.y1 (e-PCR)
- UniSTS:198934

fk41f08.x1 (e-PCR)
- UniSTS:200987

fd11d01.x1 (e-PCR)
- UniSTS:195136

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within phagocytosis, engulfment	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in protein localization	IBA Inferred from Biological aspect of Ancestor more info
involved_in signal transduction	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: 14-3-3 protein beta/alpha-A

Names: 14-3-3 protein beta/alpha-1; tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.