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    1700039E22Rik RIKEN cDNA 1700039E22 gene [ Mus musculus (house mouse) ]

    Gene ID: 73322, updated on 6-Oct-2024

    Summary

    Official Symbol
    1700039E22Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700039E22 geneprovided by MGI
    Primary source
    MGI:MGI:1920572
    See related
    Ensembl:ENSMUSG00000092369 AllianceGenome:MGI:1920572
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See 1700039E22Rik in Genome Data Viewer
    Location:
    19 C3; 19 38.13 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (44816932..44824377, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (44828493..44835938, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene Pax2 5' regulatory region Neighboring gene predicted gene, 35610 Neighboring gene paired box 2 Neighboring gene microRNA 6405 Neighboring gene STARR-seq mESC enhancer starr_46250 Neighboring gene STARR-seq mESC enhancer starr_46251 Neighboring gene 3-phosphoglycerate dehydrogenase pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E1526 Neighboring gene STARR-positive B cell enhancer ABC_E11031 Neighboring gene SMC5-SMC6 complex localization factor 2 Neighboring gene predicted gene, 25482

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045315.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK006641
      Related
      ENSMUST00000174082.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      44816932..44824377 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)