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    TCERG1L-AS1 TCERG1L antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 101927489, updated on 10-Dec-2024

    Summary

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    Official Symbol
    TCERG1L-AS1provided by HGNC
    Official Full Name
    TCERG1L antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:49532
    See related
    AllianceGenome:HGNC:49532
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See TCERG1L-AS1 in Genome Data Viewer
    Location:
    10q26.3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (131095218..131095777)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (132030258..132030817)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (132893481..132894040)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene microRNA 378c Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132796630-132797497 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132797498-132798364 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132800566-132801066 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132801067-132801567 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr10:132821112-132821721 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132822677-132823607 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132834068-132834857 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132834858-132835646 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:132845839-132846362 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:132846885-132847407 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr10:132847408-132847929 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:132848100-132849299 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:132854747-132855248 Neighboring gene uncharacterized LOC107984186 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132896749-132897250 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132910233-132910733 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:132912815-132913526 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:132913527-132914236 Neighboring gene transcription elongation regulator 1 like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132925623-132926277 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:132924967-132925622 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:132933630-132934350 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132939121-132940002 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132941811-132942311 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132945413-132945914 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132965569-132966069 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132976970-132977517 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132977518-132978064 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132979500-132980020 Neighboring gene uncharacterized LOC105378563 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133048467-133049038 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133047894-133048466 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133049039-133049610 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133050816-133051316 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133051317-133051817 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133057495-133058060 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133060331-133060830 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133062787-133063287 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133075620-133076135 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133077535-133078178 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr10:133078179-133078822 Neighboring gene uncharacterized LOC101927461

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_120623.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL390203

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      131095218..131095777
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      132030258..132030817
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Other Literature Sources
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    Research Materials