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    SNRK2.9 SNF1-related protein kinase 2.9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816833, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SNRK2.9
    Official Full Name
    SNF1-related protein kinase 2.9
    Primary source
    TAIR:AT2G23030
    Locus tag
    AT2G23030
    See related
    Araport:AT2G23030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F21P24.9; F21P24_9; SNF1-related protein kinase 2.9; SNRK2-9; SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-9
    Summary
    encodes a member of SNF1-related protein kinases (SnRK2)
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    Genomic context

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    See SNRK2.9 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Sequence:
    Chromosome: 2; NC_003071.7 (9803492..9806731, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene serine carboxypeptidase-like 9 Neighboring gene tRNA-Met Neighboring gene ncRNA Neighboring gene Phototropic-responsive NPH3 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis Protein Phosphatase PIA1 Impairs Plant Drought Tolerance by Serving as a Common Negative Regulator in ABA Signaling Pathway. Huang Y, et al. Plants (Basel), 2023 Jul 21. PMID 37514328, Free PMC Article
    2. Arabidopsis decuple mutant reveals the importance of SnRK2 kinases in osmotic stress responses in vivo. Fujii H, et al. Proc Natl Acad Sci U S A, 2011 Jan 25. PMID 21220313, Free PMC Article
    3. Catalytic mechanism and kinase interactions of ABA-signaling PP2C phosphatases. Zhou XE, et al. Plant Signal Behav, 2012 May. PMID 22516825, Free PMC Article
    4. Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. Ito J, et al. J Proteome Res, 2011 Apr 1. PMID 21166475
    5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_127867.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to osmotic stress IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    SNF1-related protein kinase 2.9
    NP_179885.1
    • SNF1-related protein kinase 2.9 (SNRK2.9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to osmotic stress; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase 2.1 (TAIR:AT5G08590.1); Has 112546 Blast hits to 110839 proteins in 2935 species: Archae - 116; Bacteria - 12803; Metazoa - 41707; Fungi - 12071; Plants - 26207; Viruses - 501; Other Eukaryotes - 19141 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9803492..9806731 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127867.5 → NP_179885.1  SNF1-related protein kinase 2.9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179885.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O64812, Q84WJ7
      UniProtKB/TrEMBL
      A0A178VSC8, A0A5S9X0J7
      Conserved Domains (1) summary
      cl21453
      Location:3 → 259
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O64812.1

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