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    WW domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818702, updated on 18-Sep-2024

    Summary

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    Official Full Name
    WW domain-containing protein
    Primary source
    TAIR:AT2G41020
    Locus tag
    AT2G41020
    See related
    Araport:AT2G41020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AT2G41030; T3K9.21; T3K9_21
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    12
    Sequence:
    Chromosome: 2; NC_003071.7 (17117214..17121124)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene calmodulin (CAM)-binding protein of 25 kDa Neighboring gene ncRNA Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene PQ-loop repeat family protein / transmembrane family protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene ncRNA Neighboring gene Basic-leucine zipper (bZIP) transcription factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_129667.5
    NM_201925.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    WW domain-containing protein
    NP_181635.2
    • WW domain-containing protein; CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); Has 960 Blast hits to 908 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 521; Fungi - 106; Plants - 105; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink).
    NP_973654.1
    • WW domain-containing protein; CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17117214..17121124
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129667.5 → NP_181635.2  WW domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181635.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X5Y8, Q67ZZ1
      Conserved Domains (1) summary
      pfam00397
      Location:194 → 224
      WW; WW domain

    2. NM_201925.2 → NP_973654.1  WW domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973654.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VPL2, F4IJ31
      Conserved Domains (2) summary
      smart00456
      Location:193 → 226
      WW; Domain with 2 conserved Trp (W) residues
      pfam00397
      Location:241 → 269
      WW; WW domain
    Nucleotide Protein
    Heading Accession and Version

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