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    Ribosomal protein L18ae/LX family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818011, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribosomal protein L18ae/LX family protein
    Primary source
    TAIR:AT2G34480
    Locus tag
    AT2G34480
    See related
    Araport:AT2G34480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13P17.34
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (14532624..14534409, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene HMG-box (high mobility group) DNA-binding family protein Neighboring gene AGAMOUS-like 29 Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene urease accessory protein G Neighboring gene cytochrome P450, family 710, subfamily A, polypeptide 2 Neighboring gene cytochrome P450, family 710, subfamily A, polypeptide 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ribosomal protein L18aB is required for both male gametophyte function and embryo development in Arabidopsis. Yan H, et al. Sci Rep, 2016 Aug 9. PMID 27502163, Free PMC Article
    2. The ribosomal protein L10/QM-like protein is a component of the NIK-mediated antiviral signaling. Rocha CS, et al. Virology, 2008 Oct 25. PMID 18789471
    3. Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. Chang IF, et al. Plant Physiol, 2005 Mar. PMID 15734919, Free PMC Article
    4. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article
    5. High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Giavalisco P, et al. Plant Mol Biol, 2005 Mar. PMID 15821981

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_129000.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mRNA binding HDA PubMed 
    enables mRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen tube growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    part_of cytosolic large ribosomal subunit HDA PubMed 
    located_in cytosolic ribosome HDA PubMed 
    located_in endoplasmic reticulum HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    Ribosomal protein L18ae/LX family protein
    NP_180995.1
    • Ribosomal protein L18ae/LX family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18ae/LX (InterPro:IPR021138), Ribosomal protein L18ae (InterPro:IPR002670); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae/LX family protein (TAIR:AT1G29965.1); Has 759 Blast hits to 757 proteins in 282 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 159; Plants - 155; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14532624..14534409 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336516.1 → NP_001323764.1  Ribosomal protein L18ae/LX family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AY36
      Conserved Domains (1) summary
      pfam01775
      Location:121 → 168
      Ribosomal_L18A; Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A

    2. NM_129000.4 → NP_180995.1  Ribosomal protein L18ae/LX family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180995.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O64699, P51418
      UniProtKB/TrEMBL
      A0A178VW11, A0A5S9X3U6, B9DHX3
      Conserved Domains (1) summary
      pfam01775
      Location:82 → 129
      Ribosomal_L18A; Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P51418.2

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