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    B3 domain protein, putative (DUF313) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817286, updated on 18-Sep-2024

    Summary

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    Official Full Name
    B3 domain protein, putative (DUF313)
    Primary source
    TAIR:AT2G27410
    Locus tag
    AT2G27410
    See related
    Araport:AT2G27410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12K2.1; F12K2_1
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (11724427..11725419, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene plastid transcriptionally active protein Neighboring gene Cysteine proteinases superfamily protein Neighboring gene ARM repeat superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128301.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    B3 domain protein, putative (DUF313)
    NP_180310.2
    • Domain of unknown function (DUF313); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF313 (InterPro:IPR005508); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF313) (TAIR:AT2G32645.1); Has 140 Blast hits to 140 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11724427..11725419 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128301.2 → NP_180310.2  B3 domain protein, putative (DUF313) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180310.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IFU0, Q9XIP5
      UniProtKB/TrEMBL
      A0A654EWN8, A0A7G2EBJ3
      Conserved Domains (1) summary
      pfam03754
      Location:67 → 178
      DUF313; Domain of unknown function (DUF313)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9XIP5.2

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