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    Uncharacterized protein family (UPF0497) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839428, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Uncharacterized protein family (UPF0497)
    Primary source
    TAIR:AT1G03700
    Locus tag
    AT1G03700
    See related
    Araport:AT1G03700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CASP-like protein 1C2; CASPL1C2; F21B7.30
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (920950..922098)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene thioredoxin M-type 1 Neighboring gene DTW domain-containing protein Neighboring gene Cystatin/monellin superfamily protein Neighboring gene Cysteine proteinases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_100249.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Uncharacterized protein family (UPF0497)
    NP_563689.1
    • Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G03540.1); Has 592 Blast hits to 592 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 592; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      920950..922098
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100249.5 → NP_563689.1  Uncharacterized protein family (UPF0497) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563689.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LR57
      UniProtKB/TrEMBL
      A0A178WAG7, A0A5S9SEH6
      Conserved Domains (1) summary
      cl04571
      Location:11 → 155
      MARVEL; Membrane-associating domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LR57.1

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