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    ERD9 Glutathione S-transferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837576, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ERD9
    Official Full Name
    Glutathione S-transferase family protein
    Primary source
    TAIR:AT1G10370
    Locus tag
    AT1G10370
    See related
    Araport:AT1G10370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGSTU17; EARLY-RESPONSIVE TO DEHYDRATION 9; F14N23.26; F14N23_26; GLUTATHIONE S-TRANSFERASE; GLUTATHIONE S-TRANSFERASE 30; GLUTATHIONE S-TRANSFERASE 30B; GLUTATHIONE S-TRANSFERASE TAU 17; GLUTATHIONE S-TRANSFERASE U17; GST30; GST30B; GSTU17
    Summary
    Encodes GSTU17 (Glutathione S-Transferase U17). Functions as a negative component of stress-mediated signal transduction pathways in drought and salt stress responses.
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    Genomic context

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    See ERD9 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (3396883..3398358, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ankyrin repeat family protein Neighboring gene DNAJ heat shock family protein Neighboring gene glutathione S-transferase TAU 18 Neighboring gene Putative membrane lipoprotein Neighboring gene Vps51/Vps67 family (components of vesicular transport) protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Drought and salt stress tolerance of an Arabidopsis glutathione S-transferase U17 knockout mutant are attributed to the combined effect of glutathione and abscisic acid. Chen JH, et al. Plant Physiol, 2012 Jan. PMID 22095046, Free PMC Article
    2. A glutathione S-transferase regulated by light and hormones participates in the modulation of Arabidopsis seedling development. Jiang HW, et al. Plant Physiol, 2010 Dec. PMID 20935176, Free PMC Article
    3. Probing the diversity of the Arabidopsis glutathione S-transferase gene family. Wagner U, et al. Plant Mol Biol, 2002 Jul. PMID 12090627
    4. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AtGSTU17 plays role in adaptive responses to drought and salt stresses by functioning as a negative component of stress-mediated signal transduction pathways.
      Title: Drought and salt stress tolerance of an Arabidopsis glutathione S-transferase U17 knockout mutant are attributed to the combined effect of glutathione and abscisic acid.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    NM_100911.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glutathione transferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within de-etiolation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within glutathione metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within lateral root development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within negative regulation of response to water deprivation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to growth hormone IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within toxin catabolic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm NAS
    Non-traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Glutathione S-transferase family protein
    NP_172508.4
    • EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to water deprivation, response to karrikin, toxin catabolic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 18 (TAIR:AT1G10360.1); Has 6064 Blast hits to 6029 proteins in 1096 species: Archae - 0; Bacteria - 2896; Metazoa - 397; Fungi - 130; Plants - 2065; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3396883..3398358 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100911.6 → NP_172508.4  Glutathione S-transferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172508.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q94II0, Q9FUS8, Q9SY80
      UniProtKB/TrEMBL
      A0A178WC98, A0A5S9TLW9, A0A654E8F4
      Conserved Domains (2) summary
      cd03185
      Location:91 → 221
      GST_C_Tau; C-terminal, alpha helical domain of Class Tau Glutathione S-transferases
      cd03058
      Location:6 → 79
      GST_N_Tau; GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FUS8.1

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