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    ECT8 evolutionarily conserved C-terminal region 8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844267, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ECT8
    Official Full Name
    evolutionarily conserved C-terminal region 8
    Primary source
    TAIR:AT1G79270
    Locus tag
    AT1G79270
    See related
    Araport:AT1G79270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    evolutionarily conserved C-terminal region 8
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    Genomic context

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    See ECT8 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (29815470..29819678)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene AGC kinase 1.7 Neighboring gene nitrobindin heme-binding domain protein Neighboring gene nuclear pore anchor Neighboring gene tRNA-Lys Neighboring gene tRNA-Lys

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. N(6)-methyladenosine-mediated feedback regulation of abscisic acid perception via phase-separated ECT8 condensates in Arabidopsis. Wu X, et al. Nat Plants, 2024 Mar. PMID 38448725
    2. An abscisic acid-responsive protein interaction network for sucrose non-fermenting related kinase1 in abiotic stress response. Carianopol CS, et al. Commun Biol, 2020 Mar 26. PMID 32218501, Free PMC Article
    3. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
    4. In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings. Reichel M, et al. Plant Cell, 2016 Oct. PMID 27729395, Free PMC Article
    5. Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Bach-Pages M, et al. Biomolecules, 2020 Apr 24. PMID 32344669, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N[6]-methyladenosine-mediated feedback regulation of abscisic acid perception via phase-separated ECT8 condensates in Arabidopsis.
      Title: N(6)-methyladenosine-mediated feedback regulation of abscisic acid perception via phase-separated ECT8 condensates in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001334878.1
    NM_001334879.1
    NM_001334880.1
    NM_106577.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mRNA binding HDA PubMed 
    enables mRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    evolutionarily conserved C-terminal region 8
    NP_565205.1
    • evolutionarily conserved C-terminal region 8 (ECT8); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 6 (TAIR:AT3G17330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29815470..29819678
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106577.4 → NP_565205.1  evolutionarily conserved C-terminal region 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565205.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W7Z6, A0A7G2E665, Q9FPE7
      Conserved Domains (1) summary
      pfam04146
      Location:321 → 463
      YTH; YT521-B-like domain

    2. NM_001334880.1 → NP_001321641.1  evolutionarily conserved C-terminal region 8 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARJ2, A0A5S9WVT6, A0A654EQB5
      Conserved Domains (1) summary
      pfam04146
      Location:306 → 448
      YTH; YT521-B-like domain

    3. NM_001334878.1 → NP_001321640.1  evolutionarily conserved C-terminal region 8 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARJ2, A0A5S9WVT6, A0A654EQB5
      Conserved Domains (1) summary
      pfam04146
      Location:306 → 448
      YTH; YT521-B-like domain

    4. NM_001334879.1 → NP_001321639.1  evolutionarily conserved C-terminal region 8 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARJ2, A0A5S9WVT6, A0A654EQB5
      Conserved Domains (1) summary
      pfam04146
      Location:306 → 448
      YTH; YT521-B-like domain
    Nucleotide Protein
    Heading Accession and Version

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