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    RUS2 root UVB sensitive protein (Protein of unknown function, DUF647) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817675, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RUS2
    Official Full Name
    root UVB sensitive protein (Protein of unknown function, DUF647)
    Primary source
    TAIR:AT2G31190
    Locus tag
    AT2G31190
    See related
    Araport:AT2G31190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16D14.3; F16D14_3; ROOT UV-B SENSITIVE 2; weak auxin response1; WXR1
    Summary
    Encodes RUS2 (root UVB sensitive2), a DUF647-containing protein that is homologous to the RUS1 protein. RUS2 works with RUS1 in a root UV-B sensing pathway that plays a vital role in Arabidopsis early seedling morphogenesis and development. Required for auxin polar transport.
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    Genomic context

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    See RUS2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Sequence:
    Chromosome: 2; NC_003071.7 (13291191..13293799, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Cysteinyl-tRNA synthetase, class Ia family protein Neighboring gene myb domain protein 14 Neighboring gene actin depolymerizing factor 6 Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis ROOT UVB SENSITIVE2/WEAK AUXIN RESPONSE1 is required for polar auxin transport. Ge L, et al. Plant Cell, 2010 Jun. PMID 20562234, Free PMC Article
    2. Diurnal variation of transitory starch metabolism is regulated by plastid proteins WXR1/WXR3 in Arabidopsis young seedlings. Zou W, et al. J Exp Bot, 2021 Apr 2. PMID 33571997
    3. root uv-b sensitive mutants are suppressed by specific mutations in ASPARTATE AMINOTRANSFERASE2 and by exogenous vitamin B6. Leasure CD, et al. Mol Plant, 2011 Jul. PMID 21511809, Free PMC Article
    4. ROOT UV-B SENSITIVE2 acts with ROOT UV-B SENSITIVE1 in a root ultraviolet B-sensing pathway. Leasure CD, et al. Plant Physiol, 2009 Aug. PMID 19515790, Free PMC Article
    5. Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. Ferro M, et al. Mol Cell Proteomics, 2003 May. PMID 12766230

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Diurnal variation of transitory starch metabolism is regulated by plastid proteins WXR1/WXR3 in Arabidopsis young seedlings.
      Title: Diurnal variation of transitory starch metabolism is regulated by plastid proteins WXR1/WXR3 in Arabidopsis young seedlings.
    2. Specific asp2 mutations partially suppresses the rus1 and rus2 mutant phenotype.
      Title: root uv-b sensitive mutants are suppressed by specific mutations in ASPARTATE AMINOTRANSFERASE2 and by exogenous vitamin B6.
    3. RUS2/WXR1 is required for auxin transport and to maintain the normal levels of PIN proteins in the root.
      Title: Arabidopsis ROOT UVB SENSITIVE2/WEAK AUXIN RESPONSE1 is required for polar auxin transport.
    4. RUS2 works with RUS1 in a root UV-B-sensing pathway that plays a vital role in Arabidopsis early seedling morphogenesis and development.[RUS2]
      Title: ROOT UV-B SENSITIVE2 acts with ROOT UV-B SENSITIVE1 in a root ultraviolet B-sensing pathway.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_001202720.1
    NM_128675.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within auxin polar transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to UV-B IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast envelope HDA PubMed 
    located_in plastid HDA PubMed 
    located_in plastid IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    root UVB sensitive protein (Protein of unknown function, DUF647)
    NP_001189649.1
    • ROOT UV-B SENSITIVE 2 (RUS2); INVOLVED IN: response to UV-B, auxin polar transport; LOCATED IN: mitochondrion, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT5G49820.1).
    NP_565718.1
    • ROOT UV-B SENSITIVE 2 (RUS2); INVOLVED IN: response to UV-B, auxin polar transport; LOCATED IN: mitochondrion, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT5G49820.1); Has 444 Blast hits to 440 proteins in 132 species: Archae - 0; Bacteria - 2; Metazoa - 112; Fungi - 71; Plants - 190; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13291191..13293799 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128675.3 → NP_565718.1  root UVB sensitive protein (Protein of unknown function, DUF647) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565718.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IQQ5, Q9SJX7
      UniProtKB/TrEMBL
      A0A178VQM6, A0A654EYW5
      Conserved Domains (1) summary
      pfam04884
      Location:61 → 294
      DUF647; Vitamin B6 photo-protection and homoeostasis

    2. NM_001202720.1 → NP_001189649.1  root UVB sensitive protein (Protein of unknown function, DUF647) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189649.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQ89, A0A654EYW5
      Conserved Domains (1) summary
      pfam04884
      Location:60 → 293
      DUF647; Vitamin B6 photo-protection and homoeostasis
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJX7.2

    Gene LinkOut

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