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    ARL2 ARG1-like 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842292, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARL2
    Official Full Name
    ARG1-like 2
    Primary source
    TAIR:AT1G59980
    Locus tag
    AT1G59980
    See related
    Araport:AT1G59980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARF-LIKE 2; ARG1-like 2; ATDJC39; GPS4; gravity persistence signal 4; T2K10.3; T2K10_3
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    Genomic context

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    See ARL2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (22080689..22086845)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DEA(D/H)-box RNA helicase family protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001333873.1
    NM_104690.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ARG1-like 2
    NP_176206.2
    • ARG1-like 2 (ARL2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, carpel, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 1 (TAIR:AT1G24120.1); Has 25507 Blast hits to 25492 proteins in 3344 species: Archae - 188; Bacteria - 10073; Metazoa - 4427; Fungi - 2514; Plants - 2606; Viruses - 73; Other Eukaryotes - 5626 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22080689..22086845
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333872.1 → NP_001320772.1  ARG1-like 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLL9, A0A1P8ANV3, A0A5S9WMZ4

    2. NM_104690.4 → NP_176206.2  ARG1-like 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176206.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6XL73, Q8GWE4, Q9ZUJ4
      UniProtKB/TrEMBL
      A0A178WLL9, A0A654EPP0
      Conserved Domains (2) summary
      PRK14295
      Location:11 → 176
      PRK14295; molecular chaperone DnaJ
      pfam00226
      Location:23 → 85
      DnaJ; DnaJ domain

    3. NM_001333873.1 → NP_001320771.1  ARG1-like 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLL9, A0A1P8ANT9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6XL73.2

    Gene LinkOut

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