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    CYP71B2 cytochrome P450, family 71, subfamily B, polypeptide 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837865, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYP71B2
    Official Full Name
    cytochrome P450, family 71, subfamily B, polypeptide 2
    Primary source
    TAIR:AT1G13080
    Locus tag
    AT1G13080
    See related
    Araport:AT1G13080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; CYTOCHROME P450 MONOOXYGENASE 71B2; F3F19.10; F3F19_10; family 71; polypeptide 2; polypeptide 2''; subfamily B
    Summary
    cytochrome P450 monooxygenase
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    Genomic context

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    See CYP71B2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (4459002..4460996)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene cytochrome P450, family 71, subfamily B, polypeptide 28 Neighboring gene cytochrome P450, family 71, subfamily B, polypeptide 29

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene expression profiles during heat acclimation in Arabidopsis thaliana suspension-culture cells. Lim CJ, et al. J Plant Res, 2006 Jul. PMID 16807682
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_101178.4
    NM_179322.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within heat acclimation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in extracellular region HDA PubMed 

    General protein information

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    Preferred Names
    cytochrome P450, family 71, subfamily B, polypeptide 2
    NP_172767.1
    • ''cytochrome P450, family 71, subfamily B, polypeptide 2'' (CYP71B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone, heat acclimation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 20 (TAIR:AT3G26180.1); Has 33312 Blast hits to 33067 proteins in 1707 species: Archae - 47; Bacteria - 3450; Metazoa - 12035; Fungi - 6950; Plants - 9630; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink).
    NP_849653.1
    • ''cytochrome P450, family 71, subfamily B, polypeptide 2'' (CYP71B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone, heat acclimation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 20 (TAIR:AT3G26180.1); Has 32035 Blast hits to 31943 proteins in 1691 species: Archae - 47; Bacteria - 3431; Metazoa - 11477; Fungi - 6850; Plants - 9043; Viruses - 3; Other Eukaryotes - 1184 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4459002..4460996
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101178.4 → NP_172767.1  cytochrome P450, family 71, subfamily B, polypeptide 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172767.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65788, Q41953, Q8VZK5, Q9SAE2
      UniProtKB/TrEMBL
      A0A178W6U0, A0A5S9U715, A0A654E9F4
      Conserved Domains (1) summary
      cd11072
      Location:61 → 494
      CYP71-like; cytochrome P450 family 71 and similar cytochrome P450s

    2. NM_179322.1 → NP_849653.1  cytochrome P450, family 71, subfamily B, polypeptide 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849653.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65788
      Conserved Domains (1) summary
      cl12078
      Location:17 → 382
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O65788.2

    Gene LinkOut

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