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    RLM1 Disease resistance protein (TIR-NBS-LRR class) family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842711, updated on 18-Sep-2024

    Summary

    Official Symbol
    RLM1
    Official Full Name
    Disease resistance protein (TIR-NBS-LRR class) family
    Primary source
    TAIR:AT1G64070
    Locus tag
    AT1G64070
    See related
    Araport:AT1G64070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22C12.17; F22C12_17; RESISTANCE TO LEPTOSPHAERIA MACULANS 1
    Summary
    Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.
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    Genomic context

    See RLM1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (23779927..23783449)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene respiratory burst oxidase protein F Neighboring gene Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Neighboring gene membrane-associated kinase regulator Neighboring gene Reticulan like protein B3

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ADP binding  
    enables NAD+ nucleotidase, cyclic ADP-ribose generating  
    Component Evidence Code Pubs
    located_in chloroplast  

    General protein information

    Preferred Names
    Disease resistance protein (TIR-NBS-LRR class) family
    NP_176590.2
    • RESISTANCE TO LEPTOSPHAERIA MACULANS 1 (RLM1); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: defense response to fungus, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, sepal, flower, carpel, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT2G16870.1); Has 18146 Blast hits to 14776 proteins in 597 species: Archae - 15; Bacteria - 1058; Metazoa - 1168; Fungi - 58; Plants - 15498; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      23779927..23783449
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105080.3NP_176590.2  Disease resistance protein (TIR-NBS-LRR class) family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176590.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I594, Q9SH57
      UniProtKB/TrEMBL
      A0A654EKV6
      Conserved Domains (4) summary
      PLN03210
      Location:10987
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00033
      Location:649672
      LRR_RI; leucine-rich repeat [structural motif]
      pfam01582
      Location:14177
      TIR; TIR domain
      pfam13191
      Location:188324
      AAA_16; AAA ATPase domain
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