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    formin-like protein, putative (DUF1005) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841428, updated on 18-Sep-2024

    Summary

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    Official Full Name
    formin-like protein, putative (DUF1005)
    Primary source
    TAIR:AT1G50040
    Locus tag
    AT1G50040
    See related
    Araport:AT1G50040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2J10.8; F2J10_8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (18542061..18544034)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene tubulin alpha-6 chain Neighboring gene ncRNA Neighboring gene target of rapamycin Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_103892.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    formin-like protein, putative (DUF1005)
    NP_175426.1
    • Protein of unknown function (DUF1005); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: leaf apex, leaf whorl, root, petiole, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT3G19680.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 137; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      18542061..18544034
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103892.3 → NP_175426.1  formin-like protein, putative (DUF1005) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175426.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WNL8, Q9LPM5
      Conserved Domains (1) summary
      pfam06219
      Location:1 → 452
      DUF1005; Protein of unknown function (DUF1005)
    Nucleotide Protein
    Heading Accession and Version

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