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    bZIP basic leucine-zipper 8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843221, updated on 18-Sep-2024

    Summary

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    Official Symbol
    bZIP
    Official Full Name
    basic leucine-zipper 8
    Primary source
    TAIR:AT1G68880
    Locus tag
    AT1G68880
    See related
    Araport:AT1G68880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtbZIP; basic leucine-zipper 8; T6L1.5
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    Genomic context

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    See bZIP in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (25893971..25895056, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene chaperonin 60 subunit beta Neighboring gene ncRNA Neighboring gene 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein Neighboring gene Defensin-like (DEFL) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Localization, quantification and interaction with host factors of endogenous HTLV-1 HBZ protein in infected cells and ATL. Raval GU, et al. Retrovirology, 2015 Jul 4. PMID 26140924, Free PMC Article
    2. Soybean homologs of MPK4 negatively regulate defense responses and positively regulate growth and development. Liu JZ, et al. Plant Physiol, 2011 Nov. PMID 21878550, Free PMC Article
    3. Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks. Deppmann CD, et al. Mol Biol Evol, 2006 Aug. PMID 16731568
    4. MEDIATOR25 acts as an integrative hub for the regulation of jasmonate-responsive gene expression in Arabidopsis. Çevik V, et al. Plant Physiol, 2012 Sep. PMID 22822211, Free PMC Article
    5. bZIP transcription factors in Arabidopsis. Jakoby M, et al. Trends Plant Sci, 2002 Mar. PMID 11906833

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_105562.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    basic leucine-zipper 8
    NP_177054.1
    • basic leucine-zipper 8 (bZIP); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1448 Blast hits to 1448 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 298; Fungi - 31; Plants - 1095; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25893971..25895056 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105562.3 → NP_177054.1  basic leucine-zipper 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177054.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9CA46
      UniProtKB/TrEMBL
      A0A178WI50, A0A5S9WTN4, A0A654EMC1
      Conserved Domains (1) summary
      cd14702
      Location:48 → 98
      bZIP_plant_GBF1; Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors: a DNA-binding and dimerization domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9CA46.1

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