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    phosphorylated adapter RNA export-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821588, updated on 18-Sep-2024

    Summary

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    Official Full Name
    phosphorylated adapter RNA export-like protein
    Primary source
    TAIR:AT3G20430
    Locus tag
    AT3G20430
    See related
    Araport:AT3G20430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (7121062..7123203)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene calmodulin-domain protein kinase 9 Neighboring gene RNAse THREE-like protein 2 Neighboring gene Alpha amylase family protein Neighboring gene B-cell receptor-associated protein 31-like protein Neighboring gene Major facilitator superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    NM_112934.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in snRNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    phosphorylated adapter RNA export-like protein
    NP_188678.1
    • CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7121062..7123203
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112934.4 → NP_188678.1  phosphorylated adapter RNA export-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188678.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VIS8, A0A5S9XFJ8, Q9LTP9
      Conserved Domains (1) summary
      pfam10258
      Location:94 → 174
      RNA_GG_bind; PHAX RNA-binding domain
    Nucleotide Protein
    Heading Accession and Version

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