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    Cysteine/Histidine-rich C1 domain family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818923, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Cysteine/Histidine-rich C1 domain family protein
    Primary source
    TAIR:AT2G43220
    Locus tag
    AT2G43220
    See related
    Araport:AT2G43220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14B2.16
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (17963747..17966211)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ENTH/VHS family protein Neighboring gene Phosphoenolpyruvate carboxylase family protein Neighboring gene ribonuclease P family protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Ubiquitin-like superfamily protein Neighboring gene Protein kinase superfamily protein Neighboring gene phosphoribosylformylglycinamidine synthase Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_129884.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Cysteine/Histidine-rich C1 domain family protein
    NP_181851.1
    • Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, RING-type (InterPro:IPR001841), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G45730.1); Has 1495 Blast hits to 745 proteins in 41 species: Archae - 0; Bacteria - 3; Metazoa - 111; Fungi - 0; Plants - 1367; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17963747..17966211
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129884.4 → NP_181851.1  Cysteine/Histidine-rich C1 domain family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181851.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXH5, Q8H1N4, Q9ZW73
      Conserved Domains (1) summary
      pfam03107
      Location:174 → 222
      C1_2; C1 domain
    Nucleotide Protein
    Heading Accession and Version

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