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    transcriptional regulator ATRX [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824389, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transcriptional regulator ATRX
    Primary source
    TAIR:AT3G52240
    Locus tag
    AT3G52240
    See related
    Araport:AT3G52240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (19372634..19375960, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Dihydrolipoamide acetyltransferase, long form protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene leukocyte immunoglobulin-like receptor family A protein Neighboring gene uncharacterized protein Neighboring gene Duplicated homeodomain-like superfamily protein Neighboring gene Pseudouridine synthase family protein Neighboring gene Transcription initiation factor IIF, beta subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_115084.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    transcriptional regulator ATRX
    NP_190792.2
    • unknown protein; Has 220 Blast hits to 193 proteins in 66 species: Archae - 0; Bacteria - 15; Metazoa - 53; Fungi - 33; Plants - 66; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19372634..19375960 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115084.4 → NP_190792.2  transcriptional regulator ATRX [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190792.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V7U0, A0A384KC45, A0A5S9XKC9, A0A654FF78, Q8GYC9
    Nucleotide Protein
    Heading Accession and Version

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