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    peptidase M50B-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843026, updated on 18-Sep-2024

    Summary

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    Official Full Name
    peptidase M50B-like protein
    Primary source
    TAIR:AT1G67060
    Locus tag
    AT1G67060
    See related
    Araport:AT1G67060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1O19.19; F1O19_19
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (25036502..25039439)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene membrane-associated kinase regulator Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Mannose-6-phosphate isomerase, type I Neighboring gene abscisic acid (aba)-deficient 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Waidmann S, et al. Plant Cell, 2014 Nov. PMID 25387881, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001334268.1
    NM_105376.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    peptidase M50B-like protein
    NP_176877.2
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 283 Blast hits to 281 proteins in 136 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 65; Plants - 41; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25036502..25039439
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334267.1 → NP_001321368.1  peptidase M50B-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W1Q5, A0A1P8AQN6
      Conserved Domains (1) summary
      pfam13398
      Location:1 → 157
      Peptidase_M50B; Peptidase M50B-like

    2. NM_105376.4 → NP_176877.2  peptidase M50B-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176877.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654ELP1, A0JQ16
      Conserved Domains (1) summary
      pfam13398
      Location:29 → 224
      Peptidase_M50B; Peptidase M50B-like

    3. NM_001334268.1 → NP_001321369.1  peptidase M50B-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W1Q5, A0A1P8AQN6
      Conserved Domains (1) summary
      pfam13398
      Location:1 → 157
      Peptidase_M50B; Peptidase M50B-like
    Nucleotide Protein
    Heading Accession and Version

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