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    CRK12 cysteine-rich RLK (RECEPTOR-like protein kinase) 12 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828419, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CRK12
    Official Full Name
    cysteine-rich RLK (RECEPTOR-like protein kinase) 12
    Primary source
    TAIR:AT4G23200
    Locus tag
    AT4G23200
    See related
    Araport:AT4G23200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cysteine-rich RLK (RECEPTOR-like protein kinase) 12; F21P8.90; F21P8_90
    Summary
    Encodes a cysteine-rich receptor-like protein kinase.
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    Genomic context

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    See CRK12 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (12145035..12148041, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 11 Neighboring gene ncRNA Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 13 Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001341584.1
    NM_001341585.1

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    cysteine-rich RLK (RECEPTOR-like protein kinase) 12
    NP_001320040.1
    • cysteine-rich RLK (RECEPTOR-like protein kinase) 12 (CRK12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: vacuole; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 14 (TAIR:AT4G23220.1); Has 120802 Blast hits to 119282 proteins in 4602 species: Archae - 98; Bacteria - 13812; Metazoa - 44469; Fungi - 10443; Plants - 34074; Viruses - 416; Other Eukaryotes - 17490 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12145035..12148041 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341584.1 → NP_001320040.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 12 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JNG3, O65472
      UniProtKB/TrEMBL
      A0A5S9XV24, A0A654FS36
      Conserved Domains (2) summary
      cd14066
      Location:342 → 610
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam01657
      Location:24 → 120
      Stress-antifung; Salt stress response/antifungal

    2. NM_001341585.1 → NP_001328465.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 12 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B4R8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O65472.3

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